STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_15976WDFY family member 4. (242 aa)    
Predicted Functional Partners:
BSL78_11418
Putative Fanconi anemia group M protein.
    
  0.776
BSL78_15434
CCHC-type domain-containing protein.
  
     0.514
BSL78_13292
Uncharacterized protein.
  
     0.482
BSL78_19599
Uncharacterized protein.
  
     0.476
BSL78_21277
Uncharacterized protein.
  
     0.460
BSL78_09092
Uncharacterized protein.
  
     0.449
BSL78_24064
Putative histone-lysine N-methyltransferase ASH1L-like.
   
 
  0.408
BSL78_16771
Uncharacterized protein.
   
 
  0.408
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.