STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_15715Putative NEDD8-activating enzyme E1 catalytic subunit-like. (445 aa)    
Predicted Functional Partners:
BSL78_16959
Putative ubiquitin C variant 2.
    
 0.999
BSL78_15071
Uncharacterized protein.
    
 0.989
BSL78_05259
Putative ubiquitin protein ligase.
    
 0.989
BSL78_06652
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.974
BSL78_05430
Ubuiquitin/ribosomal L40 fusion protein.
    
 0.963
BSL78_09113
S-phase kinase associated protein 1-like protein; Belongs to the SKP1 family.
    
 0.961
BSL78_12607
Putative ubiquitin-conjugating enzyme E2 variant 2-like isoform X2.
   
 
 0.958
BSL78_12538
Putative ubiquitin-conjugating enzyme E2 W.
   
 0.943
BSL78_17761
Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.934
BSL78_09004
Cullin-2; Belongs to the cullin family.
   
 
 0.914
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.