STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_15493Putative oral-facial-digital syndrome 1 protein-like. (596 aa)    
Predicted Functional Partners:
BSL78_15388
Roc domain-containing protein.
    
 0.736
BSL78_15389
Protein kinase domain-containing protein.
    
 0.736
BSL78_15387
Uncharacterized protein.
    
 0.736
BSL78_20712
Putative lisH domain-containing protein FOPNL.
   
 
 0.683
BSL78_28819
Polo-like kinase.
    
 0.638
BSL78_26492
Putative serine/threonine-protein kinase PLK1.
    
 0.638
BSL78_26075
Serine/threonine-protein kinase PLK.
    
 0.638
BSL78_07429
Polo-like kinase.
    
 0.638
BSL78_03317
Polo-like kinase; Belongs to the protein kinase superfamily.
    
 0.638
BSL78_17099
Ras-related protein Rab-11B.
    
  0.592
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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