BSL78_15430 protein (Apostichopus japonicus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

BSL78_15430

Putative A-kinase anchor protein 10, mitochondrial. (384 aa)

Predicted Functional Partners:

BSL78_23463

0.878

BSL78_23462

0.878

BSL78_19858

0.878

BSL78_15477

0.878

BSL78_10869

0.744

BSL78_09619

0.744

BSL78_17954

0.736

BSL78_14403

0.736

BSL78_10789

0.736

BSL78_10299

0.736

Your Current Organism:

Apostichopus japonicus

NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BSL78_09619	BSL78_10299	A0A2G8KZP1	A0A2G8KXR8	Putative cAMP-dependent protein kinase catalytic subunit beta-like isoform X2.	Uncharacterized protein.	0.908
BSL78_09619	BSL78_10789	A0A2G8KZP1	A0A2G8KWA9	Putative cAMP-dependent protein kinase catalytic subunit beta-like isoform X2.	Uncharacterized protein.	0.908
BSL78_09619	BSL78_14403	A0A2G8KZP1	A0A2G8KL35	Putative cAMP-dependent protein kinase catalytic subunit beta-like isoform X2.	Uncharacterized protein.	0.908
BSL78_09619	BSL78_15430	A0A2G8KZP1	A0A2G8KIA2	Putative cAMP-dependent protein kinase catalytic subunit beta-like isoform X2.	Putative A-kinase anchor protein 10, mitochondrial.	0.744
BSL78_09619	BSL78_15477	A0A2G8KZP1	A0A2G8KI25	Putative cAMP-dependent protein kinase catalytic subunit beta-like isoform X2.	Cyclic nucleotide-binding domain-containing protein.	0.962
BSL78_09619	BSL78_17954	A0A2G8KZP1	A0A2G8KB34	Putative cAMP-dependent protein kinase catalytic subunit beta-like isoform X2.	Cyclic nucleotide-binding domain-containing protein.	0.908
BSL78_09619	BSL78_19858	A0A2G8KZP1	A0A2G8K5J9	Putative cAMP-dependent protein kinase catalytic subunit beta-like isoform X2.	Putative cAMP-dependent protein kinase type I-beta regulatory subunit isoform X2.	0.962
BSL78_09619	BSL78_23462	A0A2G8KZP1	A0A2G8JVE4	Putative cAMP-dependent protein kinase catalytic subunit beta-like isoform X2.	Cyclic nucleotide-binding domain-containing protein.	0.962
BSL78_09619	BSL78_23463	A0A2G8KZP1	A0A2G8JVD6	Putative cAMP-dependent protein kinase catalytic subunit beta-like isoform X2.	Protein kinase A regulatory subunit.	0.962
BSL78_10299	BSL78_09619	A0A2G8KXR8	A0A2G8KZP1	Uncharacterized protein.	Putative cAMP-dependent protein kinase catalytic subunit beta-like isoform X2.	0.908
BSL78_10299	BSL78_10869	A0A2G8KXR8	A0A2G8KWA1	Uncharacterized protein.	Putative cAMP-dependent protein kinase catalytic subunit PRKX-like.	0.908
BSL78_10299	BSL78_15430	A0A2G8KXR8	A0A2G8KIA2	Uncharacterized protein.	Putative A-kinase anchor protein 10, mitochondrial.	0.736
BSL78_10789	BSL78_09619	A0A2G8KWA9	A0A2G8KZP1	Uncharacterized protein.	Putative cAMP-dependent protein kinase catalytic subunit beta-like isoform X2.	0.908
BSL78_10789	BSL78_10869	A0A2G8KWA9	A0A2G8KWA1	Uncharacterized protein.	Putative cAMP-dependent protein kinase catalytic subunit PRKX-like.	0.908
BSL78_10789	BSL78_15430	A0A2G8KWA9	A0A2G8KIA2	Uncharacterized protein.	Putative A-kinase anchor protein 10, mitochondrial.	0.736
BSL78_10869	BSL78_10299	A0A2G8KWA1	A0A2G8KXR8	Putative cAMP-dependent protein kinase catalytic subunit PRKX-like.	Uncharacterized protein.	0.908
BSL78_10869	BSL78_10789	A0A2G8KWA1	A0A2G8KWA9	Putative cAMP-dependent protein kinase catalytic subunit PRKX-like.	Uncharacterized protein.	0.908
BSL78_10869	BSL78_14403	A0A2G8KWA1	A0A2G8KL35	Putative cAMP-dependent protein kinase catalytic subunit PRKX-like.	Uncharacterized protein.	0.908
BSL78_10869	BSL78_15430	A0A2G8KWA1	A0A2G8KIA2	Putative cAMP-dependent protein kinase catalytic subunit PRKX-like.	Putative A-kinase anchor protein 10, mitochondrial.	0.744
BSL78_10869	BSL78_15477	A0A2G8KWA1	A0A2G8KI25	Putative cAMP-dependent protein kinase catalytic subunit PRKX-like.	Cyclic nucleotide-binding domain-containing protein.	0.962