STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_14086Putative rap guanine nucleotide exchange factor 1. (462 aa)    
Predicted Functional Partners:
BSL78_26736
Putative crk-like protein.
    
 0.991
BSL78_24772
Putative growth factor receptor-bound protein 2-like.
   
 0.928
BSL78_07364
Putative growth factor receptor-bound protein 2.
   
 0.928
BSL78_12653
Putative ras-related protein.
    
 0.905
BSL78_05433
Putative E3 ubiquitin ligase.
    
 0.892
BSL78_28337
Uncharacterized protein.
    
 0.822
BSL78_26718
Guanylate kinase-like domain-containing protein.
    
 0.822
BSL78_10340
Putative breast cancer anti-estrogen resistance protein 1-like isoform X1.
    
 0.816
BSL78_09659
Putative GPI-anchored adhesin-like protein PGA55.
    
 0.810
BSL78_26937
Putative ras-related protein.
    
 0.801
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.