STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_13358Putative EH domain-binding protein 1-like isoform X3. (347 aa)    
Predicted Functional Partners:
BSL78_18963
Tropomyosin.
   
 0.806
BSL78_05565
Putative EH domain-binding protein 1-like isoform X3.
 
     0.780
BSL78_10906
Putative peripheral plasma membrane protein CASK isoform X8.
   
  0.766
BSL78_10907
Putative peripheral plasma membrane protein CASK-like isoform X3.
   
  0.766
BSL78_25444
Putative ras-related protein.
    
 0.751
BSL78_22154
Putative GTPase-like isoform X1.
    
 0.751
BSL78_16565
Putative GTPase-like isoform X1.
    
 0.751
BSL78_07937
Putative ras-related protein.
    
 0.751
BSL78_07733
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.730
BSL78_17889
Putative serine/arginine repetitive matrix protein 1.
    
 0.716
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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