STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_11193Putative sterigmatocystin biosynthesis dehydrogenase stcV. (391 aa)    
Predicted Functional Partners:
BSL78_15282
Putative potassium voltage-gated channel subfamily A member 2-like; Belongs to the potassium channel family.
   
 0.981
BSL78_02998
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.952
BSL78_27726
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.947
BSL78_00442
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
    
 0.912
BSL78_13347
Putative nuclear pore complex protein.
   
 0.867
BSL78_05555
Putative nuclear pore complex protein.
   
 0.867
BSL78_05554
Putative nuclear pore complex protein.
   
 0.867
BSL78_04377
Putative nuclear receptor coactivator 5 isoform X2.
    
 0.866
BSL78_04378
Putative nuclear receptor coactivator 5 isoform X2.
    
 0.866
BSL78_03798
Peptidase S59 domain-containing protein.
    
 0.866
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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