STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_10420Putative cullin-associated NEDD8-dissociated protein 1-like. (361 aa)    
Predicted Functional Partners:
BSL78_13405
Putative RING-box protein 1A.
    
 0.937
BSL78_10421
Putative cullin-associated NEDD8-dissociated protein 1 isoform X2.
 
     0.930
BSL78_09004
Cullin-2; Belongs to the cullin family.
    
 0.930
BSL78_19997
Uncharacterized protein.
 
     0.926
BSL78_24736
Putative cullin-1; Belongs to the cullin family.
   
 0.920
BSL78_12688
Putative cullin-1; Belongs to the cullin family.
   
 0.920
BSL78_10422
Putative cullin-associated NEDD8-dissociated protein 1-like isoform X2.
 
      0.900
BSL78_06088
Putative cullin-5; Belongs to the cullin family.
    
 0.860
BSL78_27184
Putative cullin-3-B isoform X2; Belongs to the cullin family.
   
 0.844
BSL78_27183
Putative cullin-3-B isoform X2; Belongs to the cullin family.
   
 0.844
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.