STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_10192Putative acyl-CoA-binding domain-containing protein 5 isoform X1. (470 aa)    
Predicted Functional Partners:
BSL78_21326
Putative peroxisomal membrane protein PEX14.
   
 0.882
BSL78_22807
Putative peroxisomal biogenesis factor 3 isoform X2.
    
 0.858
BSL78_02062
Putative peroxisomal biogenesis factor 19-like.
     
 0.844
BSL78_06775
Putative mitochondrial fission 1 protein.
   
 
 0.836
BSL78_09432
Peroxisomal membrane protein PEX16.
   
 0.817
BSL78_13899
Putative peroxisomal membrane protein PEX13 isoform X2.
   
 0.762
BSL78_03193
Putative peroxisomal membrane protein PEX13-like.
   
 0.762
BSL78_05760
Putative peroxisomal membrane protein 11B isoform X2.
    
 0.748
BSL78_28046
Putative ATP-binding cassette sub-family D member 3 isoform X2.
   
 
 0.741
BSL78_18706
DUF5641 domain-containing protein.
     
 0.734
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.