STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_10118Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (79 aa)    
Predicted Functional Partners:
BSL78_02372
Uncharacterized protein.
    
 0.990
BSL78_27785
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16-like.
   
 0.982
BSL78_15174
Putative pre-mRNA-splicing factor SYF1 isoform X1.
    
 0.974
BSL78_11352
Putative pre-mRNA-processing factor 19.
    
 0.972
BSL78_22896
Putative pre-mRNA-splicing factor CWC22-like.
   
 0.969
BSL78_22894
Putative pre-mRNA-splicing factor CWC22-like.
   
 0.969
BSL78_22895
Putative pre-mRNA-splicing factor CWC22-like.
   
 0.969
BSL78_01466
Putative cell division cycle 5-like protein-like.
    
 
 0.969
BSL78_18705
Putative serine/arginine repetitive matrix protein 2 isoform X3.
   
 0.968
BSL78_05431
Putative BUD13-like.
    
 0.967
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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