STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_09848Uncharacterized protein. (2855 aa)    
Predicted Functional Partners:
BSL78_13388
Putative serine/threonine-protein kinase PLK4.
    
 0.980
BSL78_13387
Putative serine/threonine-protein kinase PLK4.
    
 0.980
BSL78_27726
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.839
BSL78_06386
HAUS6_N domain-containing protein.
   
 
 0.831
BSL78_09242
Putative WD repeat-containing protein 24.
    
  0.793
BSL78_03798
Peptidase S59 domain-containing protein.
    
 0.786
BSL78_03797
Putative nuclear pore complex protein.
    
 0.786
BSL78_02998
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
     
 0.784
BSL78_00413
Uncharacterized protein.
   
 
 0.778
BSL78_19460
Putative FACT complex subunit SPT16 isoform X2.
    
 
 0.775
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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