STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_07000Putative NADPH-dependent methylglyoxal reductase GRP2. (392 aa)    
Predicted Functional Partners:
BSL78_07938
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.959
BSL78_03812
Putative 40S ribosomal protein S15-like; Belongs to the universal ribosomal protein uS19 family.
   
 0.915
BSL78_23574
Putative 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.913
BSL78_13275
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.912
BSL78_14371
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.911
BSL78_13089
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.907
BSL78_10849
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 0.907
BSL78_11552
Uncharacterized protein.
  
  0.906
BSL78_21513
Putative 40S ribosomal protein S19.
   
 0.901
BSL78_22039
Putative 40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
   
 0.895
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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