STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_06126Putative tubulin polyglutamylase ttll6-like. (667 aa)    
Predicted Functional Partners:
BSL78_03653
Uncharacterized protein.
   
  0.802
BSL78_06617
Putative adenylosuccinate lyase isoform X1.
     
 0.714
BSL78_23858
Putative mRNA-decapping enzyme 1B-like.
    
 
 0.704
BSL78_20117
Putative mRNA-decapping enzyme 1B.
    
 
 0.704
BSL78_13921
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
     
 0.699
BSL78_12119
Putative ectonucleoside triphosphate diphosphohydrolase 5 isoform X1; Belongs to the GDA1/CD39 NTPase family.
     
 0.684
BSL78_04445
Putative ectonucleoside triphosphate diphosphohydrolase 4 isoform X1; Belongs to the GDA1/CD39 NTPase family.
     
 0.669
BSL78_29282
Putative m7GpppN-mRNA hydrolase.
    
 
 0.644
BSL78_07022
Putative m7GpppN-mRNA hydrolase.
    
 
 0.644
BSL78_08799
Putative enhancer of mRNA-decapping protein 3 isoform X3.
    
 
 0.640
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.