STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_06039Putative tribbles-like 2-like. (118 aa)    
Predicted Functional Partners:
BSL78_01533
AMPKBI domain-containing protein.
    
 0.937
BSL78_02339
Akt protein; Belongs to the protein kinase superfamily.
   
 0.921
BSL78_26538
Putative 5'-AMP-activated protein kinase subunit gamma-1 isoform X9.
   
 0.906
BSL78_26519
Putative 5'-AMP-activated protein kinase subunit gamma-1 isoform X6.
   
 0.906
BSL78_19130
Putative serine/threonine-protein kinase stk11.
    
 0.782
BSL78_26539
Putative 5'-AMP-activated protein kinase subunit gamma-3 isoform X4.
   
 0.779
BSL78_26221
Putative calcium-binding protein 39-like.
    
 0.771
BSL78_08229
Putative E3 ubiquitin-protein ligase RFWD2 isoform X3.
    
 
 0.767
BSL78_19024
Putative peroxisome proliferator-activated receptor alpha.
    
 0.752
BSL78_14326
Putative peroxisome proliferator-activated receptor alpha.
    
 0.752
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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