STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_04943Putative ADAM 17-like protease isoform X1. (732 aa)    
Predicted Functional Partners:
BSL78_09510
Putative metalloproteinase inhibitor 1.
    
 
 0.810
BSL78_09177
NTR domain-containing protein.
    
 
 0.810
BSL78_10651
Putative disintegrin and metalloproteinase domain-containing protein 10 isoform X1.
     
0.767
BSL78_05199
ADAM10 metallopeptidase.
     
0.767
BSL78_10108
Tensilin.
    
 
 0.738
BSL78_17507
Putative inactive rhomboid protein 1.
    
 0.733
BSL78_11876
Uncharacterized protein.
    
 0.727
BSL78_09757
Putative fibrillin-1.
    
 0.727
BSL78_05944
Putative fibrillin-1.
    
 0.727
BSL78_01040
Putative fibrillin-1.
    
 0.727
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.