STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_04798Putative integrator complex subunit 5-like. (879 aa)    
Predicted Functional Partners:
BSL78_18840
Putative integrator complex subunit 4.
    
 0.999
BSL78_15872
Putative integrator complex subunit 9-like.
   
 0.999
BSL78_15724
Uncharacterized protein.
    
 0.999
BSL78_12880
Putative integrator complex subunit 11-like.
    
 0.999
BSL78_07918
Putative integrator complex subunit 7.
    
 0.999
BSL78_03736
Uncharacterized protein.
    
 0.999
BSL78_14585
Putative integrator complex subunit 6-A.
    
 0.995
BSL78_23011
Integrator complex subunit 1.
    
 0.993
BSL78_05480
Integrator complex subunit 1.
    
 0.993
BSL78_05266
Putative SOSS complex subunit B1-like isoform X3.
    
 0.992
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.