STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_04699Fibrinogen C-terminal domain-containing protein. (88 aa)    
Predicted Functional Partners:
BSL78_05549
Tenascin.
  
     0.503
BSL78_21942
Fibrinogen C-terminal domain-containing protein.
  
     0.501
BSL78_07401
Fibrinogen C-terminal domain-containing protein.
  
     0.498
BSL78_03436
Fibrinogen C-terminal domain-containing protein.
  
     0.488
BSL78_15376
Putative tenascin-R-like.
  
     0.487
BSL78_20931
Fibrinogen-like protein A.
  
     0.483
BSL78_06676
Fibrinogen C-terminal domain-containing protein.
  
     0.478
BSL78_25136
Putative ficolin-1-like.
  
     0.477
BSL78_13520
Putative microfibril-associated glycoprotein 4-like.
  
     0.472
BSL78_01656
Putative microfibril-associated glycoprotein 4-like.
  
     0.448
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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