STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_04483Uncharacterized protein. (105 aa)    
Predicted Functional Partners:
BSL78_28941
Polyketide synthase 2.
  
 0.796
BSL78_23554
Putative cytochrome b5 reductase 4-like isoform X3.
  
 0.773
BSL78_11075
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
   
 
 0.751
BSL78_19493
Putative tyrosine 3-monooxygenase isoform X2.
     
 0.737
BSL78_27300
Putative dihydropteridine reductase.
   
 0.721
BSL78_22055
Putative dihydropteridine reductase.
   
 0.721
BSL78_09180
Putative methylmalonic aciduria and homocystinuria type C protein-like.
  
 
  0.711
BSL78_27647
6-pyrovoyltetrahydropterin synthase.
    
 0.696
BSL78_01419
Putative 6-pyruvoyltetrahydropterin synthase family protein.
    
 0.696
BSL78_02339
Akt protein; Belongs to the protein kinase superfamily.
    
  0.648
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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