STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_02515Uncharacterized protein. (208 aa)    
Predicted Functional Partners:
BSL78_15388
Roc domain-containing protein.
    
 0.736
BSL78_15389
Protein kinase domain-containing protein.
    
 0.736
BSL78_15387
Uncharacterized protein.
    
 0.736
BSL78_17633
Putative separin.
    
 0.591
BSL78_18723
Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.522
BSL78_06162
Malate dehydrogenase.
    
 0.493
BSL78_09880
Citrate synthase; Belongs to the citrate synthase family.
     
 0.482
BSL78_28028
Aspartate aminotransferase.
     
 0.477
BSL78_19107
Inositol-pentakisphosphate 2-kinase; Phosphorylates Ins(1,3,4,5,6)P5 at position 2 to form Ins(1,2,3,4,5,6)P6 (InsP6 or phytate).
     
 0.469
BSL78_13226
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
     
 0.469
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.