STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_023983-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family. (200 aa)    
Predicted Functional Partners:
BSL78_00385
Putative 28S ribosomal protein S5, mitochondrial isoform X3; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.953
BSL78_14834
Putative 28S ribosomal protein S35, mitochondrial isoform X3.
    
 
 0.945
BSL78_22088
Putative 39S ribosomal protein L13, mitochondrial-like.
  
   0.942
BSL78_19039
Putative 28S ribosomal protein S12, mitochondrial; Belongs to the universal ribosomal protein uS12 family.
    
 
 0.941
BSL78_23731
Putative 28S ribosomal protein S14, mitochondrial-like.
    
   0.940
BSL78_10725
Putative 39S ribosomal protein L43, mitochondrial.
    
   0.940
BSL78_10321
Putative 28S ribosomal protein S6, mitochondrial-like.
    
   0.940
BSL78_09198
Putative 39S ribosomal protein L3, mitochondrial-like; Belongs to the universal ribosomal protein uL3 family.
    
   0.940
BSL78_04981
Putative 39S ribosomal protein L4, mitochondrial isoform X1.
    
   0.940
BSL78_02833
Putative transmembrane emp24 domain-containing protein 3.
    
 
 0.940
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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