STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_01624Putative proteasome activator complex subunit 3. (230 aa)    
Predicted Functional Partners:
BSL78_18038
Proteasome subunit alpha type.
   
 0.988
BSL78_23888
Proteasome subunit alpha type.
   
 0.986
BSL78_06024
Proteasome subunit alpha type.
   
 0.985
BSL78_00160
Proteasome subunit beta.
   
 0.984
BSL78_01421
Proteasome subunit alpha type.
   
 0.983
BSL78_18168
Proteasome subunit beta.
   
 0.982
BSL78_11310
Proteasome subunit alpha type.
   
 0.980
BSL78_07489
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.979
BSL78_01001
Proteasome subunit beta.
   
 0.978
BSL78_26794
Proteasome subunit beta.
   
 0.969
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.