STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_01347Putative intraflagellar transport protein. (1133 aa)    
Predicted Functional Partners:
BSL78_17831
Putative WD repeat-containing protein 35 isoform X2.
    
 0.976
BSL78_08712
Putative WD repeat-containing protein 35-like isoform X2.
    
 0.976
BSL78_19192
Putative intraflagellar transport protein.
   
 0.964
BSL78_19191
Putative intraflagellar transport protein.
   
 0.964
BSL78_12649
Putative intraflagellar transport protein.
   
 0.964
BSL78_17126
Putative tetratricopeptide repeat protein 21B-like.
   
 0.937
BSL78_17127
Putative tetratricopeptide repeat protein 21B.
   
 0.937
BSL78_01348
Putative intraflagellar transport protein.
 
     0.935
BSL78_17286
Putative WD repeat-containing protein 19.
    
 0.922
BSL78_17285
Putative WD repeat-containing protein 19 isoform X2.
    
 0.922
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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