STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_01276Pachytene checkpoint 2-like protein; Belongs to the AAA ATPase family. (446 aa)    
Predicted Functional Partners:
BSL78_18057
Putative UBX domain-containing protein 7-like isoform X1.
   
 0.986
BSL78_02658
Putative mitotic spindle assembly checkpoint protein MAD2A.
   
 
 0.986
BSL78_02906
Putative MAD2L1-binding protein-like.
   
 
 0.982
BSL78_12038
Putative mitotic spindle assembly checkpoint protein MAD2B.
    
 
 0.968
BSL78_00518
Putative maternal embryonic leucine zipper kinase isoform X1.
   
  
 0.926
BSL78_09150
Putative meiotic recombination protein DMC1/LIM15-like; Belongs to the RecA family.
  
 
 0.915
BSL78_19334
Putative exonuclease 1 isoform X1.
  
  
 0.905
MCM7
DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...]
   
 
 0.853
BSL78_29790
Putative charged multivesicular body protein 3 isoform X3.
   
 0.839
BSL78_19137
Putative cell division cycle protein 20-like.
  
 
 0.837
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.