STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_01287Putative copper-transporting ATPase 2-like. (245 aa)    
Predicted Functional Partners:
BSL78_21719
HMA domain-containing protein.
  
 0.975
BSL78_23725
Putative PDZ domain-containing protein 11.
    
 0.733
BSL78_29370
Putative delta-1-pyrroline-5-carboxylate synthase isoform X1.
     
 0.497
BSL78_29372
Putative delta-1-pyrroline-5-carboxylate synthase isoform X2.
     
 0.497
BSL78_29371
Putative delta-1-pyrroline-5-carboxylate synthase.
     
 0.497
BSL78_08414
Putative delta-1-pyrroline-5-carboxylate synthase isoform X1.
     
 0.497
BSL78_14294
Putative zinc transporter 9.
  
 
 0.494
BSL78_02901
Putative COMM domain-containing protein 1-like.
    
 
 0.486
BSL78_23420
Laccase-type phenoloxidase; Belongs to the multicopper oxidase family.
  
 
 0.485
BSL78_22082
F5/8 type C domain-containing protein.
  
 
 0.485
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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