STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_00542Putative corepressor interacting with RBPJ 1 isoform X2. (304 aa)    
Predicted Functional Partners:
BSL78_24918
Putative histone deacetylase complex subunit SAP30L.
    
 0.905
BSL78_19946
Su(H).
    
 0.887
BSL78_07422
Putative recombining binding protein suppressor of hairless isoform X3.
    
 0.887
BSL78_08355
Putative SNW domain-containing protein 1-like.
   
 
 0.862
BSL78_08356
Putative SNW domain-containing protein 1 isoform X2.
   
 
 0.862
BSL78_01568
Putative SNW domain-containing protein 1 isoform X2.
   
 
 0.862
BSL78_08495
Putative pre-mRNA-processing-splicing factor 8.
    
 
 0.825
BSL78_08494
Putative pre-mRNA-processing-splicing factor 8-like.
    
 
 0.825
BSL78_28680
Putative serine/arginine repetitive matrix protein 2 isoform X4.
    
 0.822
BSL78_16462
Putative serine/arginine repetitive matrix protein 2 isoform X4.
    
 0.822
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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