STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_26115Putative Golgi to ER traffic protein 4-like B. (324 aa)    
Predicted Functional Partners:
BSL78_04784
Putative large proline-rich protein BAG6-like.
    
 0.986
BSL78_09624
Arsenical pump-driving ATPase; Belongs to the arsA ATPase family.
    
 0.976
BSL78_30163
Putative small glutamine-rich tetratricopeptide repeat-containing protein alpha isoform X2.
   
 0.971
BSL78_03472
Putative UV excision repair protein RAD23-like B.
    
 0.923
BSL78_28370
Putative ubiquitin-like protein 4A.
    
 0.859
BSL78_08923
Putative ubiquitin-like protein 4A.
    
 0.859
BSL78_21657
Putative tetratricopeptide repeat protein 28.
   
 0.831
BSL78_18265
Putative tetratricopeptide repeat protein 33.
   
 0.831
BSL78_02157
Small glutamine-rich tetratricopeptide repeat-containing protein beta.
   
 0.831
BSL78_07594
RING-type domain-containing protein.
   
 
 0.761
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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