STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BSL78_12677Putative STE20-related kinase adapter protein alpha isoform X1. (427 aa)    
Predicted Functional Partners:
BSL78_19130
Putative serine/threonine-protein kinase stk11.
  
 
 0.996
BSL78_26221
Putative calcium-binding protein 39-like.
    
 0.986
BSL78_23945
Uncharacterized protein.
   
 
 0.917
BSL78_07731
Putative translocation protein SEC62 isoform X1.
    
 
 0.914
BSL78_16487
Non-specific serine/threonine protein kinase.
    
0.841
BSL78_01533
AMPKBI domain-containing protein.
     
 0.840
BSL78_26519
Putative 5'-AMP-activated protein kinase subunit gamma-1 isoform X6.
     
 0.816
BSL78_02983
Putative serine/threonine-protein kinase WNK3.
    
 
 0.808
BSL78_02079
Putative testis-specific serine/threonine-protein kinase 1-like.
  
 
 0.804
BSL78_28505
Putative translocation protein SEC63-like.
    
 
 0.803
Your Current Organism:
Apostichopus japonicus
NCBI taxonomy Id: 307972
Other names: A. japonicus, Japanese sea cucumber, Stichopus japonicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.