STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPUHeterogeneous nuclear ribonucleoprotein U. (847 aa)    
Predicted Functional Partners:
ENSARWP00000001035
annotation not available
    
 0.926
ENSARWP00000023152
annotation not available
   
 0.886
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.876
HNRNPC
Heterogeneous nuclear ribonucleoprotein C.
   
 0.825
DHX9
DExH-box helicase 9.
   
 0.814
ENSARWP00000011016
annotation not available
   
 0.796
RBMX
RNA binding motif protein X-linked.
   
 0.781
YBX1
Y-box binding protein 1.
   
 0.780
POLR2A
RNA polymerase II subunit A.
   
  0.743
HNRNPA3
Heterogeneous nuclear ribonucleoprotein A3.
   
 0.740
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.