STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIPK1Receptor interacting serine/threonine kinase 1. (695 aa)    
Predicted Functional Partners:
FADD
Fas associated via death domain.
   
 0.997
TRADD
TNFRSF1A associated via death domain.
   
0.996
TNFRSF1A
TNF receptor superfamily member 1A.
   
 0.996
CFLAR
CASP8 and FADD like apoptosis regulator.
    
 0.987
ENSARWP00000001745
annotation not available
    
 0.986
TAB2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 0.986
TLR3
Toll like receptor 3.
   
 0.979
BIRC2
Baculoviral IAP repeat containing 2.
   
 0.973
TRAF5
TNF receptor associated factor 5.
   
 0.972
TNFAIP3
TNF alpha induced protein 3.
   
 0.969
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.