STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GABRA6Gamma-aminobutyric acid type A receptor alpha6 subunit. (464 aa)    
Predicted Functional Partners:
GABARAPL1
Gamma-aminobutyric acid receptor-associated protein-like 1.
    
 0.904
GABRD
Gamma-aminobutyric acid type A receptor delta subunit.
  
0.902
GABARAPL2
GABA type A receptor associated protein like 2.
    
 0.900
GABRP
Gamma-aminobutyric acid type A receptor pi subunit.
  
0.814
NSF
N-ethylmaleimide sensitive factor, vesicle fusing ATPase.
    
 0.793
GPHN
Gephyrin.
    
 0.749
ENSARWP00000015867
annotation not available
    
 0.749
GABRB3
Gamma-aminobutyric acid type A receptor beta3 subunit.
  
0.741
GABRR2
Gamma-aminobutyric acid receptor subunit rho-2.
  
0.740
GABRB2
Gamma-aminobutyric acid type A receptor beta2 subunit.
  
0.740
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.