STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EXD2Exonuclease 3'-5' domain containing 2. (621 aa)    
Predicted Functional Partners:
RPA3
Replication protein A3.
    
 0.884
EXO1
Exonuclease 1.
   
 0.839
MEIOB
Meiosis specific with OB-fold.
    
 0.815
RPA1
Replication protein A1.
    
 0.815
FEN1
Flap structure-specific endonuclease 1.
   
 0.813
TOP3A
DNA topoisomerase III alpha.
    
 0.797
RAD52
RAD52 homolog, DNA repair protein.
    
 0.793
XRCC6
X-ray repair cross complementing 6.
    
 
 0.769
XRCC3
X-ray repair cross complementing 3.
    
 0.757
XRCC5
X-ray repair cross complementing 5.
    
 
 0.757
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.