STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSARWP00000002976annotation not available (162 aa)    
Predicted Functional Partners:
SDC3
Syndecan 3.
     
 0.488
ENSARWP00000001230
annotation not available
     
 0.444
GPC6
Glypican 6.
     
 0.444
GPC1
Glypican 1.
     
 0.444
GPC4
Glypican 4.
     
 0.444
ENSARWP00000020638
annotation not available
     
 0.427
SDC4
Syndecan 4.
     
 0.408
GPC5
Glypican 5.
     
 0.406
ENSARWP00000003242
annotation not available
     
 0.406
GPC3
Glypican 3.
     
 0.406
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.