STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUP54Nucleoporin 54. (500 aa)    
Predicted Functional Partners:
NUP62CL
Nucleoporin 62 C-terminal like.
   
 0.999
RANBP2
E3 SUMO-protein ligase RanBP2-like.
   
 0.999
NUP98
Nucleoporin 98.
   
 0.998
NUP93
Nucleoporin 93.
   
 0.998
NUP155
Nucleoporin 155.
   
 0.997
NUP205
Nucleoporin 205.
   
 0.997
ENSARWP00000013236
annotation not available
   
 0.995
NUP58
Nucleoporin 58.
   
 0.995
NUP214
Nucleoporin 214.
    
 0.993
NUP85
Nucleoporin 85.
   
 0.992
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.