STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112978647Epidermal retinol dehydrogenase 2-like. (289 aa)    
Predicted Functional Partners:
ENSARWP00000012597
annotation not available
  
 0.921
ALDH1A3
Aldehyde dehydrogenase 1 family member A3.
  
 0.880
CD3E
CD3e molecule.
   
 0.874
ALDH1A1
Aldehyde dehydrogenase 1 family member A1.
  
 0.869
ALDH1A2
Aldehyde dehydrogenase 1 family member A2.
  
 0.869
CYP26A1
Cytochrome P450 26A1.
   
 
 0.857
RETSAT
Retinol saturase.
    
 0.843
SDR16C5
Epidermal retinol dehydrogenase 2-like.
  
  
 
0.838
BCO1
Beta-carotene oxygenase 1.
   
 
 0.836
CYP27C1
Cytochrome P450 27C1.
   
 
  0.836
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.