STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIRT4Sirtuin 4. (315 aa)    
Predicted Functional Partners:
GLUD1
Glutamate dehydrogenase 1.
   
 0.964
SIRT6
Sirtuin 6.
  
  
0.937
SIRT3
Sirtuin 3.
  
 
0.922
SIRT5
Sirtuin 5.
  
 
0.911
SIRT7
Sirtuin 7.
  
  
0.910
SIRT1
Sirtuin 1.
  
 
0.909
NMNAT1
Nicotinamide nucleotide adenylyltransferase 1.
   
 0.881
ENSARWP00000007665
annotation not available
   
 0.881
NAMPT
Nicotinamide phosphoribosyltransferase.
     
 0.881
NUDT12
Nudix hydrolase 12.
    
 0.880
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.