STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HIVEP1HIVEP zinc finger 1. (2714 aa)    
Predicted Functional Partners:
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
  0.629
ARID4B
AT-rich interaction domain 4B.
    
 0.615
KDM6A
Lysine demethylase 6A.
   
 0.573
MRPS33
Mitochondrial ribosomal protein S33.
    
 0.559
ENSARWP00000003591
annotation not available
    
  0.554
ENSARWP00000003592
annotation not available
    
  0.554
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
  0.554
MRPS11
Mitochondrial ribosomal protein S11.
    
  0.553
MRPS15
Mitochondrial ribosomal protein S15.
   
  0.548
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.548
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.