STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SORCS2Sortilin related VPS10 domain containing receptor 2. (988 aa)    
Predicted Functional Partners:
GAK
Cyclin G associated kinase.
     
 0.976
SORT1
Sortilin 1.
    
0.911
PSMA1
Proteasome 20S subunit alpha 1.
    
  0.676
PSMB1
Proteasome 20S subunit beta 1.
    
  0.676
VPS35
Vacuolar protein sorting-associated protein 35.
    
 
 0.668
IGF2R
Insulin like growth factor 2 receptor.
    
 0.665
PSMB5
Proteasome 20S subunit beta 5.
    
  0.641
PSMA4
Proteasome 20S subunit alpha 4.
    
  0.636
BDNF
Brain derived neurotrophic factor.
    
 
 0.621
PSMB4
Proteasome 20S subunit beta 4.
    
  0.610
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.