STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMCHPro-melanin concentrating hormone. (167 aa)    
Predicted Functional Partners:
HCRT
Hypocretin neuropeptide precursor.
   
 
 0.948
MCHR2
Melanin concentrating hormone receptor 2.
     
 0.928
MCHR1
Melanin-concentrating hormone receptor 1-like.
     
 0.928
LOC112968753
Inactive phospholipase C-like protein 2.
   
 
 0.888
NPY
Neuropeptide Y.
    
 0.793
POMC
Proopiomelanocortin.
     
 0.761
PDYN
Prodynorphin.
     
 0.696
OXT
Oxytocin/neurophysin I prepropeptide.
   
 
 0.696
GAL
Galanin and GMAP prepropeptide.
     
 0.675
GHRL
Ghrelin and obestatin prepropeptide.
     
 0.637
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.