STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUGT1SGT1 homolog, MIS12 kinetochore complex assembly cochaperone. (178 aa)    
Predicted Functional Partners:
HSP90B1
Heat shock protein 90 beta family member 1.
    
 0.940
SKP1
S-phase kinase associated protein 1.
   
 
 0.919
HSP90AB1
Heat shock protein 90 alpha family class B member 1.
    
 0.909
HSP90AA1
Heat shock protein 90 alpha family class A member 1.
    
 0.909
ENSARWP00000009092
annotation not available
 
      0.899
CHORDC1
Cysteine and histidine rich domain containing 1.
   
 0.895
ITGB1BP2
Integrin subunit beta 1 binding protein 2.
   
 0.895
TRAP1
TNF receptor associated protein 1.
    
 0.875
TSC1
TSC complex subunit 1.
    
 0.875
NOD1
Nucleotide binding oligomerization domain containing 1.
    
 0.872
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.