STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSARWP00000010702annotation not available (98 aa)    
Predicted Functional Partners:
RBM48
RNA binding motif protein 48.
  
 
 
 0.964
SCNM1
Sodium channel modifier 1.
    
 
 0.898
CRIPT
CXXC repeat containing interactor of PDZ3 domain.
    
 
 0.897
PHF5A
PHD finger protein 5A.
    
   0.894
ENSARWP00000002886
annotation not available
    
   0.894
SNRNP40
Small nuclear ribonucleoprotein U5 subunit 40.
    
   0.894
BUD13
BUD13 homolog.
    
   0.894
RBMX2
RNA binding motif protein X-linked 2.
    
   0.894
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
    
   0.894
SNRPD1
Small nuclear ribonucleoprotein D1 polypeptide.
    
   0.894
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.