STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC112966435Histone H2A-beta, sperm-like. (137 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.992
KDM6A
Lysine demethylase 6A.
    
 0.839
AIFM1
Apoptosis inducing factor mitochondria associated 1.
    
  0.804
ENSARWP00000025250
annotation not available
    
  0.791
H2BE1
H2B.E variant histone 1.
  
 0.778
LOC112974474
Histone H2B 5-like.
 
 0.776
LOC112964215
Histone H2B 1/2/3/4/6.
 
 0.776
LOC112962204
Histone H2B 1/2/3/4/6.
 
 0.776
LOC112971058
Histone H2B 1/2/3/4/6.
 
 0.776
LOC112963305
Histone H2B 5-like.
 
 0.775
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.