STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPN1Ribophorin I. (585 aa)    
Predicted Functional Partners:
DDOST
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit.
   
 0.999
DAD1
Defender against cell death 1.
   
 0.999
RPN2
Ribophorin II.
   
 0.999
STT3B
STT3 oligosaccharyltransferase complex catalytic subunit B.
   
 0.998
STT3A
STT3 oligosaccharyltransferase complex catalytic subunit A.
   
 0.998
MLEC
Malectin.
   
 0.997
TMEM258
Transmembrane protein 258.
   
 0.994
MAGT1
Magnesium transporter 1.
   
 0.990
TUSC3
Tumor suppressor candidate 3.
   
 0.990
SEC61G
SEC61 translocon gamma subunit.
   
 0.990
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.