STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RANBP1RAN binding protein 1. (228 aa)    
Predicted Functional Partners:
RANGAP1
Ran GTPase activating protein 1.
   
 0.996
RAN
RAN, member RAS oncogene family.
   
 0.995
ADGRD1
Adhesion G protein-coupled receptor D1.
   
 0.984
XPO1
Exportin 1.
   
 
 0.977
UBE2I
Ubiquitin conjugating enzyme E2 I.
   
 0.948
NUP93
Nucleoporin 93.
   
 0.938
SUMO2
Small ubiquitin like modifier 2.
   
 0.936
SUMO3
Small ubiquitin-related modifier 3.
   
 0.936
NUP54
Nucleoporin 54.
   
 0.935
NUP98
Nucleoporin 98.
   
 0.935
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.