STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPRA1Transmembrane protein adipocyte associated 1. (338 aa)    
Predicted Functional Partners:
MPHOSPH8
M-phase phosphoprotein 8.
      
 0.565
TRPA1
Transient receptor potential cation channel subfamily A member 1.
      
 0.518
RSPRY1
Ring finger and SPRY domain containing 1.
      
 0.512
RCBTB1
RCC1 and BTB domain containing protein 1.
   
  
 0.483
GTF3C1
General transcription factor IIIC subunit 1.
      
 0.439
NUDT13
Nudix hydrolase 13.
      
 0.422
IP6K2
Inositol hexakisphosphate kinase 2.
      
 0.420
ZC3H15
Zinc finger CCCH-type containing 15.
      
 0.418
FBXO9
F-box protein 9.
      
 0.410
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.