STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LTBP2Latent transforming growth factor beta binding protein 2. (1673 aa)    
Predicted Functional Partners:
TGFB2
Transforming growth factor beta 2.
    
 0.768
TGFB3
Transforming growth factor beta 3.
   
 0.758
THBS1
Thrombospondin 1.
     
 0.715
ENSARWP00000000084
annotation not available
    
 0.711
ITGB6
Integrin subunit beta 6.
    
 0.669
ARID4B
AT-rich interaction domain 4B.
    
 0.668
ARID4A
AT-rich interaction domain 4A.
    
 0.666
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.652
ITGB8
Integrin subunit beta 8.
    
 0.600
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.595
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.