STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POLRMTRNA polymerase mitochondrial. (1108 aa)    
Predicted Functional Partners:
TFB2M
Transcription factor B2, mitochondrial.
   
 0.996
TFAM
Transcription factor A, mitochondrial.
    
 0.989
TFB1M
Transcription factor B1, mitochondrial.
   
 0.984
SRFBP1
Serum response factor binding protein 1.
   
 0.979
DIMT1
DIMT1 rRNA methyltransferase and ribosome maturation factor.
   
 0.941
POLR1B
RNA polymerase I subunit B.
   
  
 0.862
POLR2B
RNA polymerase II subunit B.
   
  
 0.751
SHROOM2
Shroom family member 2.
  
 
 0.742
ENSARWP00000000059
annotation not available
    
 0.741
ACO2
Aconitase 2.
    
 0.741
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.