STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZBTB8OSZinc finger and BTB domain containing 8 opposite strand. (164 aa)    
Predicted Functional Partners:
RTCB
RNA 2',3'-cyclic phosphate and 5'-OH ligase.
  
 0.993
DDX1
DEAD-box helicase 1.
     
 0.959
FAM98B
Family with sequence similarity 98 member B.
    
 0.947
RTRAF
RNA transcription, translation and transport factor.
     
 0.932
C2orf49
Chromosome unknown C2orf49 homolog.
     
 0.928
ETF1
Eukaryotic translation termination factor 1.
  
    0.803
GART
Trifunctional purine biosynthetic protein adenosine-3.
    
  0.451
LOC112971849
Trifunctional purine biosynthetic protein adenosine-3-like.
    
  0.451
SLC2A12
Solute carrier family 2 member 12.
     
 0.422
THUMPD2
THUMP domain containing 2.
      
 0.422
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.