STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COPB1Coatomer protein complex subunit beta 1. (953 aa)    
Predicted Functional Partners:
ARCN1
Archain 1.
   
 0.999
COPB2
Coatomer protein complex subunit beta 2.
   
 0.999
COPA
Coatomer protein complex subunit alpha.
   
 0.999
COPE
Coatomer protein complex subunit epsilon.
   
 0.998
ENSARWP00000000916
annotation not available
   
 0.995
COPG2
Coatomer protein complex subunit gamma 2.
   
 0.994
COPG1
Coatomer protein complex subunit gamma 1.
   
 0.994
PRR15L
Proline rich 15 like.
   
 0.981
SCYL3
SCY1 like pseudokinase 3.
    
 0.954
DIPK2A
Divergent protein kinase domain 2A.
     
 0.928
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.