STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNAT1MNAT1 component of CDK activating kinase. (296 aa)    
Predicted Functional Partners:
LOC112974619
General transcription factor IIH subunit 2.
   
 0.999
CCNH
Cyclin H.
   
 0.999
ERCC2
ERCC excision repair 2, TFIIH core complex helicase subunit.
    
 0.999
GTF2H1
General transcription factor IIH subunit 1.
    
 0.999
CDK7
Cyclin dependent kinase 7.
   
 0.999
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
    
 0.999
GTF2E2
General transcription factor IIE subunit 2.
   
 0.997
ENSARWP00000004434
annotation not available
    
 0.991
POLR2C
RNA polymerase II subunit C.
    
 0.991
GTF2F2
General transcription factor IIF subunit 2.
   
 0.989
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.