STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LUMLumican. (343 aa)    
Predicted Functional Partners:
FBN1
Fibrillin 1.
   
 0.960
SPARC
Secreted protein acidic and cysteine rich.
   
  
 0.939
DCN
Decorin.
  
  
0.938
FASLG
Fas ligand.
    
 0.898
TGFB2
Transforming growth factor beta 2.
    
 0.874
FMOD
Fibromodulin.
  
 
0.801
OGN
Osteoglycin.
   
 
0.792
ACAN
Aggrecan.
    
 0.791
ADGRL3
Adhesion G protein-coupled receptor L3.
    
  0.749
ENSARWP00000002159
annotation not available
    
  0.749
Your Current Organism:
Apteryx rowi
NCBI taxonomy Id: 308060
Other names: A. rowi, Apteryx australis rowii, Apteryx rowii, Okarito brown kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.